Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015866931.1_cds_XP_016432923.1_29121
CDS Infomation

[gene=LOC107759478] [db_xref=GeneID:107759478] [protein=coatomer subunit beta-1-like] [protein_id=XP_016432923.1] [location=complement(join(32262..32466,33406..33491,33899..34453,34505..34526,34606..35168))] [gbkey=CDS]
Sequence

ATGGAGAAGTCCTGTTCTTTGCTGATACACTTTGATAAGGGCACACCAGCTCTTGCCAAT
GAGATCAAGGAAGCCCTCGAAGGGAATGATGTTCCTGCCAAGGTTGATGCCATGAAGAAG
GCCGTCATGCTTTTGTTGAATGGCGAAACACTACCCCAGCTGTTTATTACTATTATTAGA
TATGTCTTGCCCTCTGAGGATCACACGATTCAAAAGCTGCTGGTTCTGTATCTGGAGACT
ATTGAGAAGACCGATTCTAAGGGAAGTGTGCTGCCTGAAATGGTCCTAATTTGTCAGAAC
CTGAGGAATAACTTGCAGCATCCAAATGAGTACATTCGTGGAGTTACTTTGAGATTCCTT
TGTCGGCTGAATGAGGTTGATATAATTGAACCTTTGATTCCATCTATTATGAGCAACTTG
GAGCACCGACATCCGTACGTGAGGAGAAATGCAATTCTTGCTGTCATGGCTGTTTACAAG
CTTCCACAGGGTGAGCAGCTCGTGGCAGATGCACCAGAGAAGATTGAGAACGTCCTTACC
ACGGAGCAGGATCCATCAGCANGTTTCTACATAATGCCAGAGCTCTTGAAATTTGTTCCT
CCATGTCCTAAATACATTTCTGTTTGCCAGGGCATGAGCCAGCTGGAGTTGGAAGATGCA
GTTCACGATGATTTGAAACGTGCCACTGGAGAATTTGTCAAGGATGAGAATGATGCTAAT
AGACTAAATCGGGTTCTGCAACTCACGGGATTTAGTGATCCTGTTTATGCTGAAGCATAC
GTGACAGTTCATCATTATGATATTGTCCTGGATGTGACAGTTATTAATAGAACTAAAGAG
ACCCTCCAGAATTTATGTTTGGAATTGGCAACAATGGGTGATCTCAAACTTGTTGAGCGT
CCACAGAATTATACTCTTGCTCCTGAGTCAAGCAAACAGATAAAAGCAAACATCAAGGTG
TCTTCAACTGAGACTGGCGTCATTTTTGGGAACATTGTTTATGAGAGTTCTAATGTGCTT
GAGCGGACAGTGGTTGTGCTAAACGATATCCATATTGACATCATGGATTACATCTCTCCT
GCAGTGTGCAGTGATGCTGCTTTTAGAACCATGTGGGCAGAATTTGAGTGGGAAAACAAG
GTTGCTGTCAACACTGTCATTCAAGAGGAAAAAGAATTTCTTGACCATATAATCAAATCA
ACCAACATGAAATGCCTTACTGCACTGTCTGCATTGGAAGGGCAATGCGGGTTCCTTGCT
GCTAACTTGTATGCAAAGAGTGTGTTTGGTGAGGATGCTTTGGTGAATGTAAGCATTGAG
AAACAAGCAGATGGTAAGCTGAGTGGTTATATTAGGATAAGGAGCAAAACGCAAGGAATT
GCGCTTAGCTTGGGGGACAAGATAACACTCAAGCAGAAGGGAGGCAGTTGA

Peptide Sequence

PEP ID

XP_016432923.1
PEP Infomation

PREDICTED: coatomer subunit beta-1-like [Nicotiana tabacum]
Sequence

MEKSCSLLIHFDKGTPALANEIKEALEGNDVPAKVDAMKKAVMLLLNGETLPQLFITIIR
YVLPSEDHTIQKLLVLYLETIEKTDSKGSVLPEMVLICQNLRNNLQHPNEYIRGVTLRFL
CRLNEVDIIEPLIPSIMSNLEHRHPYVRRNAILAVMAVYKLPQGEQLVADAPEKIENVLT
TEQDPSAXFYIMPELLKFVPPCPKYISVCQGMSQLELEDAVHDDLKRATGEFVKDENDAN
RLNRVLQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVER
PQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYESSNVLERTVVVLNDIHIDIMDYISP
AVCSDAAFRTMWAEFEWENKVAVNTVIQEEKEFLDHIIKSTNMKCLTALSALEGQCGFLA
ANLYAKSVFGEDALVNVSIEKQADGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

Transcript Sequence

Gene sequence data has not been registered.